Added the ability to run with multiple seeds per model to match the AlphaFold-Multimer paper.Removed unused bias argument in GlobalAttention (thanks Removed prokaryotic MSA pairing algorithm as it didn’t improve accuracy on average.Use DeviceRequest rather than runtime=nvidia to expose GPUs to the container (thanks Simplified mounting of files in Docker.Added new AlphaFold-Multimer models with greatly reduced numbers of clashes on average and slightly increased accuracy.
Read the updated AlphaFold-Multimer paper for more details.Ī number of other bug fixes and small improvements have been made. These new models have greatly reduced numbers of clashes on average and are slightly more accurate. Version v2.2.0 updates the AlphaFold-Multimer model parameters.
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